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Computational Biology and Bioinformatics Service Core - Tool Access |
Our subscription users get access to our library of bioinformatics tools, basic research databases, and biomedical content management systems. Subscription entails receiving a 2GB UNIX account, a MySQL account, a document management account and a wiki root page.
- Software provided includes: PSI-BLAST, BLAT, S-BLEST, SIFT, BioPerl, BioPython, LAGAN, MODELLER, CHIMERA, PYMOL, VMD, SVM-LITE, CYTOSCAPE, DOCK5, DSSP, EMBOSS, CRP, HMMER, and others.
- Databases provided include: PDB (updated weekly), UCSC Genome databases (human, mouse, rat), Ensembl Genome databases (human, mouse), SCOP, GO, DO, ASTRAL 40/60/90, HapMap, dbSNP, and others.
- Web based tools include: MediaWiki, KnowledgeTree Document Management System, and others.
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